Online ISSN: 1365-2052  Print ISSN: 0268-9146
Animal Genetics

A nonsense mutation in the myeloperoxidase gene is responsible for hereditary myeloperoxidase deficiency in an Italian hound dog
Fabio Gentilini, Elisa Zambon, Danilo Mancini, Maria Elena Turba
Abstract
Published Online: 14 June 2016
DOI 10.1111/age.12463
Not another type of potato: MC1R and the russet coloration of Burmese cats
N. A. Gustafson, B. Gandolfi, L. A. Lyons
Abstract
Published Online: 27 September 2016
DOI 10.1111/age.12505
Identification of molecular markers for oocyte competence in bovine cumulus cells
E. O. Melo, D. M. Cordeiro, R. Pellegrino, Z. Wei, Z. J. Daye, R. C. Nishimura, M. A. N. Dode
Abstract
Published Online: 21 September 2016
DOI 10.1111/age.12496
Bayesian analysis of parent-specific transmission ratio distortion in seven Spanish beef cattle breeds
J. Casellas, J. J. Caas-lvarez, A. Gonzlez-Rodrguez, A. Puig-Oliveras, M. Fina, J. Piedrafita, A. Molina, C. Daz, J. A. Bar, L. Varona
Abstract
Published Online: 21 September 2016
DOI 10.1111/age.12509
Genome-wide proteomics analysis on longissimus muscles in Qinchuan beef cattle
Hua He, Si Chen, Wei Liang, Xiaolin Liu
Abstract
Published Online: 19 September 2016
DOI 10.1111/age.12508
Single nucleotide polymorphisms in exomes of high- and low-marbled meats in Korean cattle
Sungchul Shin, Changpyo Hong, Sanghoon Song, Kung Ahn, Euiryong Chung
Abstract
Published Online: 19 September 2016
DOI 10.1111/age.12479
Using RNA-Seq SNP data to reveal potential causal mutations related to pig production traits and RNA editing
A. M. Martnez-Montes, A. Fernndez, D. Prez-Montarelo, E. Alves, R. M. Bentez, Y. Nuez, C. vilo, N. Ibaez-Escriche, J. M. Folch, A. I. Fernndez
Abstract
Published Online: 18 September 2016
DOI 10.1111/age.12507
Genome-wide linkage disequilibrium and past effective population size in three Korean cattle breeds
P. Sudrajad, D. W. Seo, T. J. Choi, B. H. Park, S. H. Roh, W. Y. Jung, S. S. Lee, J. H. Lee, S. Kim, S. H. Lee
Abstract
Published Online: 18 September 2016
DOI 10.1111/age.12488
Allelic heterogeneity of albinism in the domestic cat
Marie Abitbol, Philippe Boss, Bndicte Grimard, Lionel Martignat, Laurent Tiret
Abstract
Published Online: 15 September 2016
DOI 10.1111/age.12503
Genetic diversity and genomic signatures of selection among cattle breeds from Siberia, eastern and northern Europe
T. Iso-Touru, M. Tapio, J. Vilkki, T. Kiseleva, I. Ammosov, Z. Ivanova, R. Popov, M. Ozerov, J. Kantanen
Abstract
Published Online: 15 September 2016
DOI 10.1111/age.12473
A genome-wide association study identifies a region strongly associated with symmetrical onychomadesis on chromosome 12 in dogs
S. Dahlgren, M. Lund Ziener, F. Lingaas
Abstract
Published Online: 14 September 2016
DOI 10.1111/age.12469
Evidence of positive selection and concerted evolution in the rapidly evolving PRDM9 zinc finger domain in goats and sheep
S. Ahlawat, P. Sharma, R. Sharma, R. Arora, N. K. Verma, B. Brahma, P. Mishra, S. De
Abstract
Published Online: 13 September 2016
DOI 10.1111/age.12487
Genome-wide association studies identify susceptibility loci affecting respiratory disease in Chinese Erhualian pigs under natural conditions
X. Huang, T. Huang, W. Deng, G. Yan, H. Qiu, Y. Huang, S. Ke, Y. Hou, Y. Zhang, Z. Zhang, S. Fang, L. Zhou, B. Yang, J. Ren, H. Ai, L. Huang
Abstract
Published Online: 12 September 2016
DOI 10.1111/age.12504
Mining long noncoding RNA in livestock
R. Weikard, W. Demasius, C. Kuehn
Abstract
Published Online: 12 September 2016
DOI 10.1111/age.12493
Identification of new single nucleotide polymorphisms affecting total number born and candidate genes related to ovulation rate in Chinese Erhualian pigs
L. C. He, P. H. Li, X. Ma, S. P. Sui, S. Gao, S. W. Kim, Y. Q. Gu, Y. Huang, N. S. Ding, R. H. Huang
Abstract
Published Online: 12 September 2016
DOI 10.1111/age.12492
Ectopic position of duplicated KIT gene in African Nguni cattle, associated with color sidedness, confirms its shared ancestry with the Bos taurus lineage
Izabela Szczerbal, Terence J. Robinson, Assumpta Duran, Sewellyn C. Davey, Magnus Andersson, Marek Switonski
Abstract
Published Online: 12 September 2016
DOI 10.1111/age.12495
Genome-wide association study for semen traits of the bulls in Chinese Holstein
Chunhua Qin, Hongwei Yin, Xu Zhang, Dongxiao Sun, Qin Zhang, Jianfeng Liu, Xiangdong Ding, Yi Zhang, Shengli Zhang
Abstract
Published Online: 9 September 2016
DOI 10.1111/age.12433
Involvement of tyrosinase-related protein 1 gene in the light brown plumage phenotype of Falco cherrug
Claudia Cortimiglia, Bianca Castiglioni, Flavia Pizzi, Alessandra Stella, Emanuele Capra
Abstract
Published Online: 9 September 2016
DOI 10.1111/age.12506
Validation of a candidate causative mutation for white spotting in donkeys
David J. Fenn, Terje Raudsepp, Ernest G. Cothran, Natasha A. Hamilton, Bianca Haase
Abstract
Published Online: 9 September 2016
DOI 10.1111/age.12494
Identification of the sex-determining region in flathead grey mullet (Mugil cephalus)
L. Dor, A. Shirak, H. Rosenfeld, I. M. Ashkenazi, M. R. Band, A. Korol, Y. Ronin, E. Seroussi, J. I. Weller, M. Ron
Abstract
Published Online: 9 September 2016
DOI 10.1111/age.12486
Identification of genes and proteins associated with anagen wool growth
J. Zhao, N. Liu, K. Liu, J. He, J. Yu, R. Bu, M. Cheng, W. De, J. Liu, H. Li
Abstract
Published Online: 9 September 2016
DOI 10.1111/age.12480
Ruminal expression of the NQO1, RGS5, and ACAT1 genes may be indicators of feed efficiency in beef steers
R. J. Kern, C. M. Zarek, A. K. Lindholm-Perry, L. A. Kuehn, W. M. Snelling, H. C. Freetly, H. C. Cunningham, A. M. Meyer
Abstract
Published Online: 9 September 2016
DOI 10.1111/age.12490
zanardi: an open-source pipeline for multiple-species genomic analysis of SNP array data
Gabriele Marras, Attilio Rossoni, Hermann Schwarzenbacher, Stefano Biffani, Filippo Biscarini, Ezequiel L. Nicolazzi
Abstract
Published Online: 7 September 2016
DOI 10.1111/age.12485
Genome-wide association study for ham weight loss at first salting in Italian Large White pigs: towards the genetic dissection of a key trait for dry-cured ham production
L. Fontanesi, G. Schiavo, M. Gallo, C. Baiocco, G. Galimberti, S. Bovo, V. Russo, L. Buttazzoni
Abstract
Published Online: 5 September 2016
DOI 10.1111/age.12491
A novel MITF variant in a white American Standardbred foal
Nicole Drig, Rony Jude, Vidhya Jagannathan, Tosso Leeb
Abstract
Published Online: 5 September 2016
DOI 10.1111/age.12484
Issue Information
Abstract
Published Online: 5 September 2016
DOI 10.1111/age.12367
Effect of swine leukocyte antigen-DQA gene variation on diarrhea in Large White, Landrace, and Duroc piglets
Q. L. Yang, X. Y. Huang, S. G. Zhao, L. X. Liu, S. W. Zhang, W. Z. Huang, S. B. Gun
Abstract
Published Online: 1 September 2016
DOI 10.1111/age.12489
Detection of selection signatures of population-specific genomic regions selected during domestication process in Jinhua pigs
Zhengcao Li, Jiucheng Chen, Zhen Wang, Yuchun Pan, Qishan Wang, Ningying Xu, Zhengguang Wang
Abstract
Published Online: 26 August 2016
DOI 10.1111/age.12475
Novel Y-chromosome short tandem repeats in Sus scrofa and their variation in European wild boar and domestic pig populations
L. Iacolina, V. Brajkovic, A. Canu, N. prem, V. Cubric-Curik, L. Fontanesi, U. Saarma, M. Apollonio, M. Scandura
Abstract
Published Online: 25 August 2016
DOI 10.1111/age.12483
Genome-wide methylation profile following prenatal and postnatal dietary omega-3 fatty acid supplementation in pigs
R. L. Boddicker, J. E. Koltes, E. R. Fritz-Waters, L. Koesterke, N. Weeks, T. Yin, V. Mani, D. Nettleton, J. M. Reecy, L. H. Baumgard, J. D. Spencer, N. K. Gabler, J. W. Ross
Abstract
Published Online: 25 August 2016
DOI 10.1111/age.12468
High-density SNP-based genetic map for Odontobutis potamophila
Hongwei Zhang, Long Huang, Shaowu Yin, Guosong Zhang, Yandong Ding, Xue Zang
Abstract
Published Online: 1 August 2016
DOI 10.1111/age.12471
A genome-wide association study of heat stress-associated SNPs in catfish
Y. Jin, T. Zhou, X. Geng, S. Liu, A. Chen, J. Yao, C. Jiang, S. Tan, B. Su, Z. Liu
Abstract
Published Online: 1 August 2016
DOI 10.1111/age.12482
Association between population structure and allele frequencies of the glycogen synthase 1 mutation in the Austrian Noriker draft horse
T. Druml, G. Grilz-Seger, M. Neuditschko, G. Brem
Abstract
Published Online: 1 August 2016
DOI 10.1111/age.12481
C-type lysozyme gene haplotypes in Rhode Island Red layer chickens are associated with hatchability and survival
Huaxiang Yan, Changsuo Yang, Junfeng Yao, Hong Li, Zhigang Xu, Jiahao Wang
Abstract
Published Online: 1 August 2016
DOI 10.1111/age.12461
Genome-wide genetic variation discovery in Chinese Taihu pig breeds using next generation sequencing
Z. Wang, Q. Chen, R. Liao, Z. Zhang, X. Zhang, X. Liu, M. Zhu, W. Zhang, M. Xue, H. Yang, Y. Zheng, Q. Wang, Y. Pan
Abstract
Published Online: 27 July 2016
DOI 10.1111/age.12465
GO-FAANG meeting: a Gathering On Functional Annotation of Animal Genomes
Christopher K. Tuggle, Elisabetta Giuffra, Stephen N. White, Laura Clarke, Huaijun Zhou, Pablo J. Ross, Herv Acloque, James M. Reecy, Alan Archibald, Rebecca R. Bellone, Michle Boichard, Amanda Chamberlain, Hans Cheng, Richard P.M.A. Crooijmans, Mary E. Delany, Carrie J. Finno, Martien A. M. Groenen, Ben Hayes, Joan K. Lunney, Jessica L. Petersen, Graham S. Plastow, Carl J. Schmidt, Jiuzhou Song, Mick Watson
Abstract
Published Online: 24 July 2016
DOI 10.1111/age.12466
Identification of copy number variations in three Chinese horse breeds using 70K single nucleotide polymorphism BeadChip array
Adiljan Kader, Xuexue Liu, Kunzhe Dong, Shen Song, Jianfei Pan, Min Yang, Xiaofei Chen, Xiaohong He, Lin Jiang, Yuehui Ma
Abstract
Published Online: 21 July 2016
DOI 10.1111/age.12451
Genetic diversity analyses reveal first insights into breed-specific selection signatures within Swiss goat breeds
A. Burren, M. Neuditschko, H. Signer-Hasler, M. Frischknecht, I. Reber, F. Menzi, C. Drgemller, C. Flury
Abstract
Published Online: 20 July 2016
DOI 10.1111/age.12476
Genome-wide DNA markers to support genetic management for domestication and commercial production in a large rodent, the Ghanaian grasscutter (Thryonomys swinderianus)
C. Adenyo, R. Ogden, B. Kayang, M. Onuma, N. Nakajima, M. Inoue-Murayama
Abstract
Published Online: 20 July 2016
DOI 10.1111/age.12478
Comprehensive investigation of nucleotide diverdity in yaks
Xiangpeng Yue, Yusheng Liang, Yulin Liang, Fadi Li
Abstract
Published Online: 20 July 2016
DOI 10.1111/age.12467
Locus-specific ancestry to detect recent response to selection in admixed Swiss Fleckvieh cattle
N. Khayatzadeh, G. Mszros, Y. T. Utsunomiya, J. F. Garcia, U. Schnyder, B. Gredler, I. Curik, J. Slkner
Abstract
Published Online: 20 July 2016
DOI 10.1111/age.12470
Effect of polymorphisms in the CAMKMT gene on growth traits in Ujumqin sheep
Xiaomeng Ma, Long Guan, Junli Xuan, Huihua Wang, Zehu Yuan, Mingming Wu, Ruizao Liu, Caiye Zhu, Caihong Wei, Fuping Zhao, Lixin Du, Li Zhang
Abstract
Published Online: 20 July 2016
DOI 10.1111/age.12455
Next generation semiconductor based sequencing of bitter taste receptor genes in different pig populations and association analysis using a selective DNA pool-seq approach
A. Ribani, F. Bertolini, G. Schiavo, E. Scotti, V. J. Utzeri, S. Dall'Olio, P. Trevisi, P. Bosi, L. Fontanesi
Abstract
Published Online: 20 July 2016
DOI 10.1111/age.12472
The Mendelian inheritance of rare flesh and shell colour variants in the black-lipped pearl oyster (Pinctada margaritifera)
Chin-Long Ky, Seiji Nakasai, Steve Pommier, Manaarii Sham Koua, Dominique Devaux
Abstract
Published Online: 20 July 2016
DOI 10.1111/age.12454
Identification and differential expression of microRNAs in the ovaries of pigs (Sus scrofa) with high and low litter sizes
L. Huang, Z. J. Yin, Y. F. Feng, X. D. Zhang, T. Wu, Y. Y. Ding, P. F. Ye, K. Fu, M. Q. Zhang
Abstract
Published Online: 20 July 2016
DOI 10.1111/age.12452
Variations at regulatory regions of the milk protein genes are associated with milk traits and coagulation properties in the Sarda sheep
A. Noce, M. Pazzola, M. L. Dettori, M. Amills, A. Castell, A. Cecchinato, G. Bittante, G. M. Vacca
Abstract
Published Online: 20 July 2016
DOI 10.1111/age.12474
Characterization of the NLRC5 promoter in chicken: SNPs, regulatory elements and CpG islands
X. M. Guo, X. P. Liu, G. B. Chang, L. Xu, Y. L. Bi, H. Z. Wang, Y. Zhang, P. F. Zhu, Y. Wu, G. H. Chen
Abstract
Published Online: 18 July 2016
DOI 10.1111/age.12450
Mapping the four-horned locus and testing the polled locus in three Chinese sheep breeds
Xiaohong He, Zhengkui Zhou, Yabin Pu, Xiaofei Chen, Yuehui Ma, Lin Jiang
Abstract
Published Online: 18 July 2016
DOI 10.1111/age.12464
Candidate gene analysis of osteochondrosis in Spanish Purebred horses
N. Sevane, S. Dunner, A. Boado, J. Caon
Abstract
Published Online: 16 July 2016
DOI 10.1111/age.12453
The SNP g.1311T>C associated with the absence of ▀-casein in goat milk influences CSN2 promoter activity
G. Cosenza, M. Iannaccone, B. A. Pico, L. Ramunno, R. Capparelli
Abstract
Published Online: 9 July 2016
DOI 10.1111/age.12443
Association analysis between feed efficiency studies and expression of hypothalamic neuropeptide genes in laying ducks
T. Zeng, L. Chen, X. Du, S. J. Lai, S. P. Huang, Y. L. Liu, L. Z. Lu
Abstract
Published Online: 22 June 2016
DOI 10.1111/age.12457
The canine era: the rise of a biomedical model
F. G. Steenbeek, M. K. Hytnen, P. A. J. Leegwater, H. Lohi
Abstract
Published Online: 21 June 2016
DOI 10.1111/age.12460
Genome-wide association study for the level of serum electrolytes ináItalian Large White pigs
S. Bovo, G. Schiavo, G. Mazzoni, S. Dall'Olio, G. Galimberti, D. G. Cal, E. Scotti, F. Bertolini, L. Buttazzoni, A. B. Samor, L. Fontanesi
Abstract
Published Online: 14 June 2016
DOI 10.1111/age.12459
A non-synonymous mutation in GDF9 is highly associated with litter size in cashmere goats
Jin Zhao, Shaoqing Liu, Xiaobing Zhou, Rui Zhang, Yan Li, Xiaolong Wang, Yulin Chen
Abstract
Published Online: 14 June 2016
DOI 10.1111/age.12447
Analysis of the porcine APOA2 gene expression in liver, polymorphism identification and association with fatty acid composition traits
M. Ballester, M. Revilla, A. Puig-Oliveras, J. A. P. Marchesi, A. Castell, J. Corominas, A. I. Fernndez, J. M. Folch
Abstract
Published Online: 14 June 2016
DOI 10.1111/age.12462
Comparison of DMRT3 genotypes among American Saddlebred horses with reference to gait
I. C. Regatieri, J. E. Eberth, F. Sarver, T. L. Lear, E. Bailey
Abstract
Published Online: 14 June 2016
DOI 10.1111/age.12458
Long-term selection for litter size in swine results in shifts in allelic frequency in regions involved in reproductive processes
M. D. Trenhaile, J. L. Petersen, S. D. Kachman, R. K. Johnson, D. C. Ciobanu
Abstract
Published Online: 26 May 2016
DOI 10.1111/age.12448
Genome-wide association study reveals novel variants for growth and egg traits in Dongxiang blue-shelled and White Leghorn chickens
R. Liao, X. Zhang, Q. Chen, Z. Wang, Q. Wang, C. Yang, Y. Pan
Abstract
Published Online: 11 May 2016
DOI 10.1111/age.12456
MFSD8 single-base pair deletion in a Chihuahua with neuronal ceroid lipofuscinosis
Philemon Karli, Anna Oevermann, Anina Bauer, Vidhya Jagannathan, Tosso Leeb
Abstract
Published Online: 5 May 2016
DOI 10.1111/age.12449
Inheritance of chronic superficial keratitis in Australian Greyhounds
Suvanna Cheng, Denise Wigney, Bianca Haase, Claire M. Wade
Abstract
Published Online: 5 May 2016
DOI 10.1111/age.12446
Genome-wide association study of growth traits in Jinghai Yellow chicken hens using SLAF-seq technology
W. H. Wang, J. Y. Wang, T. Zhang, Y. Wang, Y. Zhang, K. Han
Abstract
Published Online: 13 September 2015
DOI 10.1111/age.12346
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